Cancer-miRNA Regulatory Network

Compendium of miRNA Target Genes

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Genes Targeted by hsa-mir-1229 in MPM Mesothelioma Gordon Cluster 15 Table contains all genes in the MPM Mesothelioma Gordon cluster number 15. If a gene harbors a predicted miRNA binding site by one of the three inference methods it is displayed in the final column: M = Weeder-miRvestigator predicted site, P = PITA predicted site and T = TargetScan predicted site. Entrez ID Symbol Description hsa-mir-1229 134728 IRAK1BP1 interleukin-1 receptor-associated kinase 1 binding protein 1 [Source:HGNC Symbol;Acc:17368] zzz999 26003 GORASP2 golgi reassembly stacking protein 2, 55kDa [Source:HGNC Symbol;Acc:17500] T 79612 NAA16 N(alpha)-acetyltransferase 16, NatA auxiliary subunit [Source:HGNC Symbol;Acc:26164] zzz999 6745 SSR1 signal sequence receptor, alpha [Source:HGNC Symbol;Acc:11323] T 23279 NUP160 nucleoporin 160kDa [Source:HGNC Symbol;Acc:18017] zzz999 51257 MARCH2 membrane-associated ring finger (C3HC4) 2 [Source:HGNC Symbol;Acc:28038] zzz999 23140 ZZEF1 zinc finger, ZZ-type with EF-hand domain 1 [Source:HGNC Symbol;Acc:29027] zzz999 9218 VAPA VAMP (vesicle-associated membrane protein)-associated protein A, 33kDa [Source:HGNC Symbol;Acc:12648] T 10396 ATP8A1 ATPase, aminophospholipid transporter (APLT), class I, type 8A, member 1 [Source:HGNC Symbol;Acc:13531] T 740 MRPL49 mitochondrial ribosomal protein L49 [Source:HGNC Symbol;Acc:1176] zzz999 10026 PIGK phosphatidylinositol glycan anchor biosynthesis, class K [Source:HGNC Symbol;Acc:8965] T 25821 MTO1 mitochondrial translation optimization 1 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:19261] zzz999 55799 CACNA2D3 calcium channel, voltage-dependent, alpha 2/delta subunit 3 [Source:HGNC Symbol;Acc:15460] zzz999 10048 RANBP9 RAN binding protein 9 [Source:HGNC Symbol;Acc:13727] zzz999 51071 DERA deoxyribose-phosphate aldolase (putative) [Source:HGNC Symbol;Acc:24269] zzz999 85363 TRIM5 tripartite motif containing 5 [Source:HGNC Symbol;Acc:16276] zzz999 5058 PAK1 p21 protein (Cdc42/Rac)-activated kinase 1 [Source:HGNC Symbol;Acc:8590] zzz999 5723 PSPH phosphoserine phosphatase [Source:HGNC Symbol;Acc:9577] zzz999 2051 EPHB6 EPH receptor B6 [Source:HGNC Symbol;Acc:3396] zzz999 6595 SMARCA2 SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 2 [Source:HGNC Symbol;Acc:11098] zzz999 8570 KHSRP KH-type splicing regulatory protein [Source:HGNC Symbol;Acc:6316] zzz999 8560 DEGS1 degenerative spermatocyte homolog 1, lipid desaturase (Drosophila) [Source:HGNC Symbol;Acc:13709] zzz999 79096 C11orf49 chromosome 11 open reading frame 49 [Source:HGNC Symbol;Acc:28720] zzz999 79627 OGFRL1 opioid growth factor receptor-like 1 [Source:HGNC Symbol;Acc:21378] zzz999 9037 SEMA5A sema domain, seven thrombospondin repeats (type 1 and type 1-like), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 5A [Source:HGNC Symbol;Acc:10736] zzz999 640 BLK B lymphoid tyrosine kinase [Source:HGNC Symbol;Acc:1057] zzz999 8924 HERC2 hect domain and RLD 2 [Source:HGNC Symbol;Acc:4868] T 55327 LIN7C lin-7 homolog C (C. elegans) [Source:HGNC Symbol;Acc:17789] T 2872 MKNK2 MAP kinase interacting serine/threonine kinase 2 [Source:HGNC Symbol;Acc:7111] zzz999 10952 SEC61B Sec61 beta subunit [Source:HGNC Symbol;Acc:16993] zzz999 65985 AACS acetoacetyl-CoA synthetase [Source:HGNC Symbol;Acc:21298] T 10971 YWHAQ tyrosine 3-monooxygenase/tryptophan 5-monooxygenase activation protein, theta polypeptide [Source:HGNC Symbol;Acc:12854] zzz999 9588 PRDX6 peroxiredoxin 6 [Source:HGNC Symbol;Acc:16753] zzz999 10491 CRTAP cartilage associated protein [Source:HGNC Symbol;Acc:2379] T 112464 PRKCDBP protein kinase C, delta binding protein [Source:HGNC Symbol;Acc:9400] zzz999 4087 SMAD2 SMAD family member 2 [Source:HGNC Symbol;Acc:6768] T 6449 SGTA small glutamine-rich tetratricopeptide repeat (TPR)-containing, alpha [Source:HGNC Symbol;Acc:10819] T 9491 PSMF1 proteasome (prosome, macropain) inhibitor subunit 1 (PI31) [Source:HGNC Symbol;Acc:9571] zzz999 8702 B4GALT4 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 4 [Source:HGNC Symbol;Acc:927] T 2861 GPR37 G protein-coupled receptor 37 (endothelin receptor type B-like) [Source:HGNC Symbol;Acc:4494] zzz999 4502 MT2A metallothionein 2A [Source:HGNC Symbol;Acc:7406] zzz999 3712 IVD isovaleryl-CoA dehydrogenase [Source:HGNC Symbol;Acc:6186] zzz999 64221 ROBO3 roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:HGNC Symbol;Acc:13433] zzz999 10893 MMP24 matrix metallopeptidase 24 (membrane-inserted) [Source:HGNC Symbol;Acc:7172] zzz999 6262 RYR2 ryanodine receptor 2 (cardiac) [Source:HGNC Symbol;Acc:10484] zzz999 83941 TM2D1 TM2 domain containing 1 [Source:HGNC Symbol;Acc:24142] zzz999 2990 GUSB glucuronidase, beta [Source:HGNC Symbol;Acc:4696] zzz999 64132 XYLT2 xylosyltransferase II [Source:HGNC Symbol;Acc:15517] zzz999 9538 EI24 etoposide induced 2.4 mRNA [Source:HGNC Symbol;Acc:13276] zzz999 9684 LRRC14 leucine rich repeat containing 14 [Source:HGNC Symbol;Acc:20419] T 7773 ZNF230 zinc finger protein 230 [Source:HGNC Symbol;Acc:13024] zzz999 23598 PATZ1 POZ (BTB) and AT hook containing zinc finger 1 [Source:HGNC Symbol;Acc:13071] zzz999 23013 SPEN spen homolog, transcriptional regulator (Drosophila) [Source:HGNC Symbol;Acc:17575] zzz999 10109 ARPC2 actin related protein 2/3 complex, subunit 2, 34kDa [Source:HGNC Symbol;Acc:705] zzz999 27233 SULT1C4 sulfotransferase family, cytosolic, 1C, member 4 [Source:HGNC Symbol;Acc:11457] zzz999 7813 EVI5 ecotropic viral integration site 5 [Source:HGNC Symbol;Acc:3501] zzz999 293 SLC25A6 solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 6 [Source:HGNC Symbol;Acc:10992] T 23049 SMG1 SMG1 homolog, phosphatidylinositol 3-kinase-related kinase (C. elegans) [Source:HGNC Symbol;Acc:30045] T 755 C21orf2 chromosome 21 open reading frame 2 [Source:HGNC Symbol;Acc:1260] zzz999 51367 POP5 processing of precursor 5, ribonuclease P/MRP subunit (S. cerevisiae) [Source:HGNC Symbol;Acc:17689] zzz999 9508 ADAMTS3 ADAM metallopeptidase with thrombospondin type 1 motif, 3 [Source:HGNC Symbol;Acc:219] zzz999 79705 LRRK1 leucine-rich repeat kinase 1 [Source:HGNC Symbol;Acc:18608] zzz999 80764 THAP7 THAP domain containing 7 [Source:HGNC Symbol;Acc:23190] zzz999 9645 MICAL2 microtubule associated monoxygenase, calponin and LIM domain containing 2 [Source:HGNC Symbol;Acc:24693] zzz999 8690 JRKL jerky homolog-like (mouse) [Source:HGNC Symbol;Acc:6200] zzz999 79591 C10orf76 chromosome 10 open reading frame 76 [Source:HGNC Symbol;Acc:25788] zzz999 27230 SERP1 stress-associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:10759] zzz999 8650 NUMB numb homolog (Drosophila) [Source:HGNC Symbol;Acc:8060] T 283298 OLFML1 olfactomedin-like 1 [Source:HGNC Symbol;Acc:24473] T 7737 RNF113A ring finger protein 113A [Source:HGNC Symbol;Acc:12974] zzz999 6207 RPS13 ribosomal protein S13 [Source:HGNC Symbol;Acc:10386] zzz999 8574 AKR7A2 aldo-keto reductase family 7, member A2 (aflatoxin aldehyde reductase) [Source:HGNC Symbol;Acc:389] zzz999 4707 NDUFB1 NADH dehydrogenase (ubiquinone) 1 beta subcomplex, 1, 7kDa [Source:HGNC Symbol;Acc:7695] zzz999 8131 NPRL3 nitrogen permease regulator-like 3 (S. cerevisiae) [Source:HGNC Symbol;Acc:14124] zzz999 23510 KCTD2 potassium channel tetramerisation domain containing 2 [Source:HGNC Symbol;Acc:21294] zzz999 10423 CDIPT CDP-diacylglycerol--inositol 3-phosphatidyltransferase [Source:HGNC Symbol;Acc:1769] zzz999 5494 PPM1A protein phosphatase, Mg2+/Mn2+ dependent, 1A [Source:HGNC Symbol;Acc:9275] P 1725 DHPS deoxyhypusine synthase [Source:HGNC Symbol;Acc:2869] zzz999 22823 MTF2 metal response element binding transcription factor 2 [Source:HGNC Symbol;Acc:29535] zzz999 253982 ASPHD1 aspartate beta-hydroxylase domain containing 1 [Source:HGNC Symbol;Acc:27380] zzz999 2130 EWSR1 Ewing sarcoma breakpoint region 1 [Source:HGNC Symbol;Acc:3508] zzz999 1407 CRY1 cryptochrome 1 (photolyase-like) [Source:HGNC Symbol;Acc:2384] zzz999 22882 ZHX2 zinc fingers and homeoboxes 2 [Source:HGNC Symbol;Acc:18513] zzz999 6709 SPTAN1 spectrin, alpha, non-erythrocytic 1 (alpha-fodrin) [Source:HGNC Symbol;Acc:11273] zzz999 4698 NDUFA5 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 5, 13kDa [Source:HGNC Symbol;Acc:7688] zzz999 10478 SLC25A17 solute carrier family 25 (mitochondrial carrier; peroxisomal membrane protein, 34kDa), member 17 [Source:HGNC Symbol;Acc:10987] zzz999 4869 NPM1 nucleophosmin (nucleolar phosphoprotein B23, numatrin) [Source:HGNC Symbol;Acc:7910] zzz999 4664 NAB1 NGFI-A binding protein 1 (EGR1 binding protein 1) [Source:HGNC Symbol;Acc:7626] zzz999 6155 RPL27 ribosomal protein L27 [Source:HGNC Symbol;Acc:10328] zzz999 79174 CRELD2 cysteine-rich with EGF-like domains 2 [Source:HGNC Symbol;Acc:28150] zzz999 51631 LUC7L2 LUC7-like 2 (S. cerevisiae) [Source:HGNC Symbol;Acc:21608] zzz999 9324 HMGN3 high mobility group nucleosomal binding domain 3 [Source:HGNC Symbol;Acc:12312] zzz999 8608 RDH16 retinol dehydrogenase 16 (all-trans) [Source:HGNC Symbol;Acc:29674] zzz999 374868 ATP9B ATPase, class II, type 9B [Source:HGNC Symbol;Acc:13541] zzz999 2027 ENO3 enolase 3 (beta, muscle) [Source:HGNC Symbol;Acc:3354] zzz999 7263 TST thiosulfate sulfurtransferase (rhodanese) [Source:HGNC Symbol;Acc:12388] zzz999 538 ATP7A ATPase, Cu++ transporting, alpha polypeptide [Source:HGNC Symbol;Acc:869] zzz999 26953 RANBP6 RAN binding protein 6 [Source:HGNC Symbol;Acc:9851] zzz999 83452 RAB33B RAB33B, member RAS oncogene family [Source:HGNC Symbol;Acc:16075] T 9349 RPL23 ribosomal protein L23 [Source:HGNC Symbol;Acc:10316] zzz999 55623 THUMPD1 THUMP domain containing 1 [Source:HGNC Symbol;Acc:23807] T 6670 SP3 Sp3 transcription factor [Source:HGNC Symbol;Acc:11208] T 545 ATR ataxia telangiectasia and Rad3 related [Source:HGNC Symbol;Acc:882] zzz999 9989 PPP4R1 protein phosphatase 4, regulatory subunit 1 [Source:HGNC Symbol;Acc:9320] zzz999 4695 NDUFA2 NADH dehydrogenase (ubiquinone) 1 alpha subcomplex, 2, 8kDa [Source:HGNC Symbol;Acc:7685] zzz999 1387 CREBBP CREB binding protein [Source:HGNC Symbol;Acc:2348] T 5919 RARRES2 retinoic acid receptor responder (tazarotene induced) 2 [Source:HGNC Symbol;Acc:9868] zzz999 162494 RHBDL3 rhomboid, veinlet-like 3 (Drosophila) [Source:HGNC Symbol;Acc:16502] T 3488 IGFBP5 insulin-like growth factor binding protein 5 [Source:HGNC Symbol;Acc:5474] T 6780 STAU1 staufen, RNA binding protein, homolog 1 (Drosophila) [Source:HGNC Symbol;Acc:11370] zzz999 56948 SDR39U1 short chain dehydrogenase/reductase family 39U, member 1 [Source:HGNC Symbol;Acc:20275] zzz999 8451 CUL4A cullin 4A [Source:HGNC Symbol;Acc:2554] zzz999 23386 NUDCD3 NudC domain containing 3 [Source:HGNC Symbol;Acc:22208] T 1577 CYP3A5 cytochrome P450, family 3, subfamily A, polypeptide 5 [Source:HGNC Symbol;Acc:2638] zzz999 8428 STK24 serine/threonine kinase 24 [Source:HGNC Symbol;Acc:11403] zzz999 6936 C2orf3 chromosome 2 open reading frame 3 [Source:HGNC Symbol;Acc:1317] zzz999 2965 GTF2H1 general transcription factor IIH, polypeptide 1, 62kDa [Source:HGNC Symbol;Acc:4655] T 55140 ELP3 elongation protein 3 homolog (S. cerevisiae) [Source:HGNC Symbol;Acc:20696] zzz999 22849 CPEB3 cytoplasmic polyadenylation element binding protein 3 [Source:HGNC Symbol;Acc:21746] T 55703 POLR3B polymerase (RNA) III (DNA directed) polypeptide B [Source:HGNC Symbol;Acc:30348] zzz999 55654 TMEM127 transmembrane protein 127 [Source:HGNC Symbol;Acc:26038] zzz999 553 AVPR1B arginine vasopressin receptor 1B [Source:HGNC Symbol;Acc:896] zzz999 56267 CCBL2 cysteine conjugate-beta lyase 2 [Source:HGNC Symbol;Acc:33238] zzz999 54923 LIME1 Lck interacting transmembrane adaptor 1 [Source:HGNC Symbol;Acc:26016] zzz999 23322 RPGRIP1L RPGRIP1-like [Source:HGNC Symbol;Acc:29168] T 9013 TAF1C TATA box binding protein (TBP)-associated factor, RNA polymerase I, C, 110kDa [Source:HGNC Symbol;Acc:11534] zzz999 29914 UBIAD1 UbiA prenyltransferase domain containing 1 [Source:HGNC Symbol;Acc:30791] zzz999 65258 MPPE1 metallophosphoesterase 1 [Source:HGNC Symbol;Acc:15988] zzz999 6252 RTN1 reticulon 1 [Source:HGNC Symbol;Acc:10467] P T 123803 NTAN1 N-terminal asparagine amidase [Source:HGNC Symbol;Acc:29909] zzz999 9993 DGCR2 DiGeorge syndrome critical region gene 2 [Source:HGNC Symbol;Acc:2845] T 1806 DPYD dihydropyrimidine dehydrogenase [Source:HGNC Symbol;Acc:3012] zzz999 2764 GMFB glia maturation factor, beta [Source:HGNC Symbol;Acc:4373] T 4205 MEF2A myocyte enhancer factor 2A [Source:HGNC Symbol;Acc:6993] zzz999 25949 SYF2 SYF2 homolog, RNA splicing factor (S. cerevisiae) [Source:HGNC Symbol;Acc:19824] zzz999 4047 LSS lanosterol synthase (2,3-oxidosqualene-lanosterol cyclase) [Source:HGNC Symbol;Acc:6708] zzz999 64699 TMPRSS3 transmembrane protease, serine 3 [Source:HGNC Symbol;Acc:11877] zzz999 79921 TCEAL4 transcription elongation factor A (SII)-like 4 [Source:HGNC Symbol;Acc:26121] zzz999 56475 RPRM reprimo, TP53 dependent G2 arrest mediator candidate [Source:HGNC Symbol;Acc:24201] zzz999 22873 DZIP1 DAZ interacting protein 1 [Source:HGNC Symbol;Acc:20908] T 55715 DOK4 docking protein 4 [Source:HGNC Symbol;Acc:19868] zzz999 93664 CADPS2 Ca++-dependent secretion activator 2 [Source:HGNC Symbol;Acc:16018] T 1212 CLTB clathrin, light chain B [Source:HGNC Symbol;Acc:2091] zzz999 5307 PITX1 paired-like homeodomain 1 [Source:HGNC Symbol;Acc:9004] zzz999 5253 PHF2 PHD finger protein 2 [Source:HGNC Symbol;Acc:8920] zzz999 54957 TXNL4B thioredoxin-like 4B [Source:HGNC Symbol;Acc:26041] T 377 ARF3 ADP-ribosylation factor 3 [Source:HGNC Symbol;Acc:654] T 26504 CNNM4 cyclin M4 [Source:HGNC Symbol;Acc:105] zzz999 353 APRT adenine phosphoribosyltransferase [Source:HGNC Symbol;Acc:626] zzz999 10507 SEMA4D sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4D [Source:HGNC Symbol;Acc:10732] zzz999 81579 PLA2G12A phospholipase A2, group XIIA [Source:HGNC Symbol;Acc:18554] zzz999 79078 C1orf50 chromosome 1 open reading frame 50 [Source:HGNC Symbol;Acc:28795] zzz999 4253 CTAGE5 CTAGE family, member 5 [Source:HGNC Symbol;Acc:7057] zzz999 8706 B3GALNT1 beta-1,3-N-acetylgalactosaminyltransferase 1 (globoside blood group) [Source:HGNC Symbol;Acc:918] zzz999 4850 CNOT4 CCR4-NOT transcription complex, subunit 4 [Source:HGNC Symbol;Acc:7880] P T 55589 BMP2K BMP2 inducible kinase [Source:HGNC Symbol;Acc:18041] zzz999 51382 ATP6V1D ATPase, H+ transporting, lysosomal 34kDa, V1 subunit D [Source:HGNC Symbol;Acc:13527] zzz999 55112 WDR60 WD repeat domain 60 [Source:HGNC Symbol;Acc:21862] zzz999 51340 CRNKL1 crooked neck pre-mRNA splicing factor-like 1 (Drosophila) [Source:HGNC Symbol;Acc:15762] zzz999

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